Tang SKY, Marshall WF.  2024.  Physical forces in regeneration of cells and tissues.  Cold Spring Harbor Persp. Biol.  in press.


Lee K, Ishikawa H, Jiang C, Campbell B, Stuman E, Hu J, Gomez V, Marshall W,  Shi L  2023.  Tracking of C. reinhardtii flagellar disassembly following femtosecond laser ablation.  Proc. of SPIE  12649, 126490T-1


McGillivary RM, Sood P, Hammar K, Marshall WF. 2023. The nuclear transport factor CSE1 drives macronuclear volume increase and macronuclear node coalescence in Stentor coeruleus.  iScience. 26, 107318.


Marshall WF, Fung JC.  2023.  Homologous chromosome recognition via nonspecific interactions.   bioRxiv


Lewis G, Marshall WF.  2023.  Mitochondrial networks through the lens of mathematics.  Phys. Biol.  10.1088/1478-3975/acdcdb


Marshall WF.  2023.   The flagellar length control system:  exploring the physical biology of organelle size.    Phys Biol. 20(2):10.1088/1478-3975/acb18d


Shekhar S, Guo H, Collin SP, Marshall WF, Kanso E, Costello JH.  2023.  Cooperative hydrodynamics accompany multicellular-like colonial organization in the unicellular ciliate Stentor.  bioRxiv  


Albright AR, Angeles-Albores D, Marshall WF.  2023.  Genome wide-analysis of anterior-posterior mRNA localization in Stentor coeruleus reveals a role for the microtubule cytoskeleton.  bioRxiv


Ishikawa H, Moore J, Diener D, Delling M, Marshall WF. 2023. Testing the ion-current model for flagellar length sensing and IFT regulation. Elife  12:e82901


Bayliss F, Gartner Z, Marshall W, Rath K, Peterfreund A. 2022. Training of a diverse science workforce in a university-industry-government research partnership: center for cellular construction. ICERI2022 Proceedings, pp. 1099-1109.


Rajan D, Makushok T, Kalish A, Acuna L, Bonville A, Correa Almanza K, Garibay B, Tang E, Voss M, Lin A, Barlow K, Harrigan P, Slabodnick MM, Marshall WF.  2022.  Single-cell analysis of habituation in Stentor coeruleus.  Curr. Biol.  S0960-9822(22)01766-3. doi: 10.1016/j.cub.2022.11.010


Rajan D, Chudinov P, Marshall W. 2022. Studying habituation in Stentor coeruleus. J. Vis. Exp. 64692


Perlaza K, Zamora I, Marshall WF.  2022.  Role of intraflagellar transport in transcriptional control during flagellar regeneration in Chlamydomonas.  Mol. Biol. Cell mbcE22090444


Larson BT, Garbus J, Pollack JB, Marshall WF. 2022.  A unicellular walker controlled by a microtubule-based finite-state machine.  Curr. Biol.  S0960-9822(22)01161-7. doi: 10.1016/j.cub.2022.07.034.


Sood P, Lin A, Yan C, McGillivary R, Diaz U, Makushok T, Nadkarni A, Tang SKY, Marshall WF.  2022.  Modular, cascade-like transcriptional program of regeneration in Stentor.  Elife  11, e80778


Perlaza K, Mirvis M, Ishikawa H, Marshall W. 2022. The short flagella 1 (SHF1) gene in Chlamydomonas encodes a Crescerin TOG-domain protein required for late stages of flagellar growth. Mol. Biol. Cell 33, ar12


Lin A, Piehowski PD, Tsai CF, Makushok T, Yi L, Diaz U, Yan C, Summers D, Sood P, Smith RD, Liu T, Marshall WF.  2022.  Determining protein polarization proteome-wide using physical dissection of individual Stentor coeruleus cells.  Curr. Biol.  32, 2300-2308


Ishikawa H, Tian JL, Yu JE, Marshall WF, Qin H. 2022.  Biosynthesis of linear protein nanoarrays using the flagellar axoneme.  ACS  Synth. Biol.  11, 1454-1465


Wemmer KA, Azimzadeh J, Marshall WF. 2022. Proteomic analysis of flagella from Chlamydomonas mutants lacking the central pair apparatus reveals loss of radial spoke head proteins. bioRxiv


Navarro EJ, Marshall WF, Fung JC.  2022.  Modeling cell biological features of meiotic chromosome pairing to study interlock resolution.  PLoS Comp. Biol.  8, e1010252


Boecking CA, et al.  2022.  A simple method to generate human airway epithelial organoids with externally orientated apical membranes.   Am. J. Phyiol. Lung Cell Mol. Physiol.  322, L420-L437.


Marshall WF.  2021.  Regeneration in Stentor coeruleus.  Front. Cell Dev. Biol.  9:753625


Bauer D, Ishikawa H, Wemmer KA, Hendel NL, Kondev J, Marshall WF.  2021.  Analysis of biological noise in the flagellar length control system.  iScience  24, 102354.


Zhang KS, Blauch LR, Huang W, Marshall WF, Tang SKY.  2021.  Microfluidic guillotine reveals multiple timescales and mechanical modes of wound response in Stentor coeruleus.  BMC Biology 19, 63.


Diaz U, Marshall WF, Riggs B. 2021. Drosophila Embryo Preparation and Microinjection for Live Cell Microscopy Performed using an Automated High Content Analyzer. J. Vis. Exp. 167, e61589, doi:10.3791/61589


Sheung JY, Otsuka M, Seifert G, Lin A, Marshall WF. 2021.  Analysis of motility patterns of Stentor during and after oral apparatus regeneration using cell tracking.  J. Vis. Exp.  170, doi: 10.3791/62352.


Lewis GR, Marshall WF, Jones BA.  2021.  Modeling the dynamics of within-host viral infection and evolution predicts quasispecies distributions and phase boundaries separating distinct classes of infections.  bioRxiv


Marshall WF.  2020.  Pattern formation and complexity in single cells.  Curr. Biol.  30, R544-552.  


Wemmer K, Ludington W, Marshall WF. 2020. Testing the role of intraflagellar transport in flagellar length control using length-altering mutants of Chlamydomonas. Philos Trans R Soc Lond B Biol Sci 375(1792):20190159


Marshall WF. 2020. Axopodia and the cellular "arms" race. Cytoskeleton


Ma R, Hendel NL, Marshall WF, Qin H. 2020. Speed and Diffusion of Kinesin-2 Are Competing Limiting Factors in Flagellar Length-Control Model. Biophys J. 118(11):2790-2800.  


Marshall WF. 2020. Scaling of subcellular structures. Ann. Rev. Cell Dev. Biol.


Bianco S, Chan YH, Marshall WF. 2020. Towards computer aided design of cellular structure. Phys. Biol. 17, 023001.


Wan KY, Hürlimann SK, Fenix AM, McGillivary RM, Makushok T, Burns E, Sheung JY, Marshall WF. 2020. Reorganization of complex ciliary flows around regenerating Stentor coeruleus. Philos Trans R Soc Lond B Biol Sci 375, 20190167


Ramirez-San Juan GR, Mathijssen AJTM, He M, Jan L, Marshall WF, Prakash M. 2020. Multi-scale spatial heterogeneity enhances particle clearance in airway ciliary arrays. Nature Physics


Lin A, Summers D, Reiff SB, Tipton AR, Tang SKY, Marshall WF.  2020.  Aurora kinase inhibitors delay regeneration in Stentor coeruleus at an intermediate step.  Science Matters  ISSN:  2297-9239


Kimmel JC, Hwang A, Marshall WF, Brack A. 2020. Aging induces aberrant state transition kinetics in murine muscle stem cells. Development 147, dev183855


Zimmerman TG, Bianco S, McGillivary RM, Marshall WF.  2020.  Creating a three-dimensional model from a sequence of images.  U.S. Patent 10,810,759


Marshall WF. 2019. Cellular Cognition: sequential logic in a giant protist. Curr. Biol. 29, R1303-R1305.


Diaz U, Bergman Z, Johnson B, Edington AR, de Cruz MA, Marshall WF, Riggs B. 2019. Microtubules are necessary for proper Reticulon localization during mitosis. PLoS One 14, e0226327


Chang AY, Marshall WF. 2019. Dynamics of living cells in a cytomorphological state space. Proc. Natl. Acad. Sci. U.S.A. 116, 21556-21562


Yu W, Marshall WF, Metzger RJ, Brakeman PR, Morsut L, Lim WA, Mostov KE. 2019. Design rules for kidney branching morphogenesis. Cell Systems. 9, P221-P227,


Kimmel JC, Brack A, Marshall WF. 2019. Deep convolutional and recurrent neural networks for cell motility discrimination and prediction. IEEE/ACM Trans. Comp. Biol. Bioinformatics doi: 10.1109/TCBB.2019.2919307


Ishikawa H, Yu JE, Tian J, Tang SKY, Qin H, Marshall WF. 2019. Cell-based biosynthesis of linear protein nanoarrays. Proc. SPIE 108930F


Marshall WF, Fung JC.  2019.  Modeling meiotic chromosome pairing: a tug of war between telomere forces and a pairing-based Brownian ratchet leads to increased pairing fidelity.  Phys Biol. 2019 May 7;16(4):046005


Li S, Fernandez JJ, Marshall WF, Agard DA  2019.  Electron cryo-tomography provides insight into procentriole architecture and assembly mechanism.  Elife. 8. pii: e43434


Smith DL, Oke A, Pollard M, Anderson SM, Zhuge T, Yam P Gromova T, Connant K, Chu DB, Patel NJ, Gonzalez F, Stoddard C, Burgess S, Hochwagen A, Marshall WF, Blackburn E, Fung JC.  2019.  A New Role for Telomerase in Promoting Meiotic Homolog Pairing Fidelity.  bioRxiv


Marshall WF.  2018.  A Dilution Model for Embryonic Scaling.  Dev Cell. 46(5):529-530


Lin A, Makushok T, Diaz U, Marshall WF.  2018.  Methods for the Study of Regeneration in Stentor.  J Vis Exp. (136). doi: 10.3791/57759


Tang SKY, Marshall WF.  2018.  Cell learning.  Curr Biol. 28(20):R1180-R1184.


Hendel N, Thomson M, Marshall WF.  2018 Diffusion as a ruler: modeling kinesin diffusion as a length sensor for intraflagellar transport.  Biophysical Journal 114: 663-674. doi:


Kimmel JC, Chang AY, Brack AS, Marshall WF.  2018.  Inferring cell state by quantitative motility analysis reveals a dynamic state system and broken detailed balance.  PLoS Computational Biology 14(1): e1005927. doi:

Tang Z, Hu Y, Wang Z, Jiang K, Zhan C, Marshall WF, Tang N.  2018 Mechanical Forces Program the Orientation of Cell Division during Airway Tube Morphogenesis.  Dev. Cell 244: 313-325. 


Condon A, Kirchner H, Lariviere D, Marshall WF, Noireaux V, Tlusty T, Fourmentin E. 2018. Will biologists become computer scientists? EMBO Reports 19, E46628.


Marshall WF.  2018.  An inordinate fondness for protists.  Curr. Biol.  28, R92-95.

Sood P, McGillivary R, Marshall WF..  2017.  The Transcriptional Program of Regeneration in the Giant Single Cell, Stentor coeruleus.  bioRxiv. doi:

Slabodnick MM, Ruby JG, Reiff SB, Swart EC, Gosai S, Prabakaran S, Witkowska E, Larue GE, Fisher S, Freeman RM Jr, Gunawardena J, Chu W, Stover NA, Gregory BD, Nowacki M, Derisi J, Roy SW, Marshall WF, Sood P.  2017.  The macronuclear genome of Stentor coeruleus reveals tiny introns in a giant cell.  Curr Biol. 2017 27(4):569-575. 


Ishikawa H, Marshall WF.  2017.  Testing the time-of-flight model for flagellar length sensing.   Mol Biol Cell.  28:3447-3456. doi: 10.1091/mbc.E17-06-0384

Blauch LR, Gai Y, Khor JW, Sood P, Marshall WF, Tang SKY..  2017.  Microfluidic guillotine for single-cell wound repair studies.   Proc Natl Acad Sci U S A..  114(28):7283-7288. 

Tang SKY, Marshall WF..  2017.  Self-repairing cells: How single cells heal membrane ruptures and restore lost structures.   Science.  356(6342):1022-1025. 

Russell JJ, Theriot JA, Sood P, Marshall WF, Landweber LF, Fritz-Laylin L, Polka JK, Oliferenko S, Gerbich T, Gladfelter A, Umen J, Bezanilla M, Lancaster MA, He S, Gibson MC, Goldstein B, Tanaka EM, Hu CK, Brunet A.  2017.  Non-model model organisms.   BMC Biol. 2017 15:55. 

Reiff SB, Marshall WF.  2017.  A large kinome in a large cell: Stentor coeruleus possesses highly expanded kinase families and novel domain architectures. 
bioRxiv.  doi:

Chang AY, Marshall WF.  2017.  Organelles - understanding noise and heterogeneity in cell biology at an intermediate scale.  J Cell Sci.  130(5):819-826. 


Ishikawa H, Marshall WF.  2017.  Intraflagellar Transport and Ciliary Dynamics.  Cold Spring Harb Perspect Biol. 9(3). pii: a021998


Marshall WF, Sanchez Alvarado A, Shaw T, Tanaka EM, Unguez GA, Poss K, Kusumi K, Amaya E, Seifer A, Yang YP.  2017.  Investigating regeneration.  Dev. Cell.  43, 373-376.

Chan YH, Reyes L, Sohail SM, Tran NK, Marshall WF..  2016.  Organelle size scaling of the budding yeast vacuole by relative growth and inheritance.   Curr Biol.  May 9;26(9):1221-8. 

Marshall WF.  2016.  Cell geometry:  how cells count and measure size.  Annu Rev Biophys.  Jul 5;45:49-64. 


Marshall WF, Fung JC.  2016.  Modeling meiotic chromosome pairing:  nuclear envelope attachment, telomere-led active random motion. and anomalous diffusion.     Phys Biol. 13(2):026003. 


Kamiyama D, Sekine S, Barsi-Rhyne B, Hu J, Chen B, Gilbert LA, Ishikawa H, Leonetti MD, Marshall WF, Weissman JS, Huang B.  2016.  Versatile protein tagging in cells with split fluorescent protein.  Nat Commun. 7:11046

Ludington WB, Ishikawa H, Serebrenik YV, Ritter A, Hernandez-Lopez RA, Gunzenhauser J, Kannegaard E, Marshall WF.  2015.  A systematic comparison of mathematical models for inherent measurement of ciliary length:  how a cell can measure length and volume.  Biophys J. 108(6):1361-79. 


Marshall WF.  2015.  How Cells Measure Length on Subcellular Scales.  Trends Cell Biol. 25(12):760-768


Reiff S, Marshall WF.  2015.  Stentor, Its Cell Biology and Development.  Encyclopedia Life Science


Ishikawa H, Marshall WF  2015.  Efficient live fluorescence imaging of intraflagellar transport in mammalian primary cilia.  Methods Cell Biol. 127:189-201


Marshall WF.  2015.  Subcellular size.  Cold Spring Harb Perspect Biol. 7(6). pii: a019059.

Slabodnick MM, Marshall WF.  2014.  Stentor coeruleus.     Curr Biol. 24(17):R783-4. 

Avasthi P, Onishi M, Karpiak J, Yamamoto R, Mackinder L, Jonikas MC, Sale WS, Shoichet B, Pringle JR, Marshall WF.  2014.  Actin is required for IFT regulation in Chlamydomonas reinhardtii. Curr Biol. 24(17):2025-32. 

Kannegaard E, Rego EH, Schuck S, Feldman JL, Marshall WF..  2014.  Quantitative analysis and modeling of katanin function in flagellar length control.  Mol Biol Cell. 25(22):3686-98. 

Slabodnick MM, Ruby JG, Dunn JG, Feldman JL, DeRisi JL, Marshall WF.  2014.  The kinase regulator mob1 acts as a patterning protein for Stentor morphogenesis.  PLoS Biol. 12(5):e1001861. 

Chan YH, Marshall WF..  2014.  Organelle size scaling of the budding yeast vacuole is tuned by membrane trafficking rates.  Biophys J. 106(9):1986-96. 

Ishikawa H, Ide T, Yagi T, Jiang X, Hirono M, Sasaki H, Yanagisawa H, Wemmer KA, Stainier DY, Qin H, Kamiya R, Marshall WF.  2014.  TTC26/DYF13 is an intraflagellar transport protein required for transport of motility-related proteins into flagella.     Elife. 3:e01566. 

Yanagisawa HA, Mathis G, Oda T, Hirono M, Richey EA, Ishikawa H, Marshall WF, Kikkawa M, Qin H.  2014.  FAP20 is an inner junction protein of doublet microtubules essential for both the planar asymmetrical waveform and stability of flagella in Chlamydomonas. Mol Biol Cell. 2014 May;25(9):1472-83. 


Ishikawa H, Marshall WF.  2014.  Mechanobiology of ciliogenesis.  Bioscience  64, 1084–1091.


Marshall WF.  2014.  The Golgi is a measuring cup.  Dev. Cell  29, 259-260

Ludington WB, Wemmer KA, Lechtreck KF, Witman GB, Marshall WF.  2013.  Avalanche like behavior in ciliary import.   PNAS  110: 3925-30.

Apte ZS, Marshall WF. 2013. Statistical method for comparing the level of intracellular organization between cells.   PNAS 110: E1006-15


Marshall WF.  2013.  Differential geometry meets the cell.  Cell  154, P265-266.


Shih SM, Engel BD, Kocabas F, Bilyard T, Gennerich A, Marshall WF, Yildiz A.  2013.  Intraflagellar transport drives flagellar surface motility.  Elife  2, e00744


Tang N, Marshall WF.  2012.  Centrosome positioning in vertebrate development.   J. Cell Sci. 125(Pt 21):4951-61

Marshall WF, Young KD, Swaffer M, Wood E, Nurse P, Kimura A, Frankel J, Wallingford J, Walbot V, Qu X, Roeder AH.  2012.  What determines cell size?  BMC Biol. 10:101

Lim WA, Alvania R, Marshall WF.  2012.  Cell biology 2.0.   Trends in Cell Biology 22(12):611-2

Rafelski SM, Viana MP, Zhang Y, Chan YH, Thorn KS, Yam P, Fung JC, Li H, Costa Lda F, Marshall WF.  2012.  Mitochondrial network size scaling in budding yeast.
Science 338(6108):822-4

Ludington WB, Shi LZ, Zhu Q, Berns MW, Marshall WF.  2012.  Organelle size equalization by a constitutive process.   Curr. Biol. 22(22):2173-9

Engel BD, Ishikawa H, Wemmer KA, Geimer S, Wakabayashi K, Hirono M, Craige B, Pazour GJ, Witman GB, Kamiya R, Marshall WF.  2012.  The role of retrograde intraflagellar transport in flagellar assembly, maintenance, and function.   J. Cell Biol.  199(1):151-67

Marshall WF.  2012.  Centriole asymmetry determines algal cell geometry.   Curr Opin Plant Biol.  15(6):632-7

Chan YH, Marshall WF. 2012.  How cells know the size of their organelles.   Science  337(6099):1186-9

Marshall WF.  2012.  Organelle size control systems: From cell geometry to organelle-directed medicine   Bioessays 34:721-4

Avasthi P, Marley A, Lin H, Gregori-Puigjane E, Shoichet BK, von Zastrow M, Marshall WF.  2012.  A chemical screen identifies class a g-protein coupled receptors as regulators of cilia. ACS Chemical Biology   7:911-9.

Ishikawa H, Thompson J, Yates JR, Marshall WF.  2012.  Proteomic analysis of mammalian primary cilia  Current Biology   22:414-9.

Azimzadeh J, Wong ML, Downhour DM, Sanchez Alvarado A, Marshall WF.  2012.  Centrosome Loss in the Evolution of Planarians  Science   335:461-3.

Avasthi P, Marshall WF.  2012.  Stages of ciliogenesis and regulation of ciliary length  Differentiation  83:S30-42.


Chan YHM, Marshall WF.  2012.  Threshold-free method for three-dimensional segmentation of organelles.  Proc. SPIE  8225, 327-333.

Li s, Fernandez JJ, Marshall WF, Agard DA.  2011.  Three-dimensional structure of basal body triplet revealed by electron cryo-tomography  EMBO J.  31:552-62.

Yang Y, Sage TL, Liu Y, Ahmad TR, Marshall WF, Shiu SH, Froehlich JE, Imre KM, Osteryoung KW.  2011.  CLUMPED CHLOROPLASTS 1 is required for plastid separation in Arabidopsis  PNAS  108:18530-18535.

Tang N, Marshall WF, McMahon M, Metzger RJ, Martin GR.  2011.  Control of Mitotic Spindle Angle by the RAS-Regulated ERK1/2 Pathway Determines Lung Tube Shape  Science  333:342-345.

Ishikawa H, Marshall WF.  2011.  Ciliogenesis: building the cells antenna  Nat. Rev. Mol. Cell Biol.  12:222-234.

Rafelski SM, Keller LC, Alberts JB, Marshall WF.  2011.  Apparent diffusive motion of centrin foci in living cells: implications for diffusion-based motion in centriole duplication
Phys. Biol.  8:026010.

Engel BD, Ishikawa H, Feldman J, Wilson CW, Chuang PT, Snedecor J, Williams J, Sun Z, Marshall WF.  2011.  A cell-based screen for inhibitors of flagella-driven motility in Chlamydomonas reveals a novel modulator of ciliary length and retrograde actin flow  Cytoskeleton  68:188-203.

Marshall WF.  2011.  Origins of cellular geometry  BMC Biol. 9:57.

Marshall WF.  2011.  Centrosome size: scaling without measuring  Curr Biol.  21:R594-596.

Yang Y, Cochran DA, Gargano MD, King I, Samhat NK, Burger BP, Sabourin KR, Hou Y, Awata J, Parry DA, Marshall WF, Witman GB, Lu X.  2011.  Regulation of flagellar motility by the conserved flagellar protein CG34110/Ccdc135/FAP50.  Mol. Biol. Cell .  22:976-87.

Chan YH, Marshall WF.  2010.  Scaling properties of cell and organelle size  Organogenesis 6(2):88-96.

Azimzadeh J, Marshall WF.  2010.  Building the centriole  Curr Biol. 20(18):R816-25.

Keller LC, Wemmer KA, Marshall WF.  2010.  Influence of centriole number on mitotic spindle length and symmetry  Cytoskeleton   67(8):504-18.

Engel BD, Ludington WB, Marshall WF.  2009.  Intraflagellar transport particle size scales inversely with flagellar length: revisiting the balance-point length control model
J Cell Biol. 187(1):81-9.

Feldman JL, Marshall WF.  2009.  ASQ2 encodes a TBCC-like protein required for mother-daughter centriole linkage and mitotic spindle orientation  Curr Biol. 19(14):1238-43.


Marshall WF.  2009.  What is it like to be a cell?  Science 325, 948-948

Marshall WF. 2009.  Quantitative high-throughput assays for flagella-based motility in chlamydomonas using plate-well image analysis and transmission correlation spectroscopy  J Biomol Screen. 14(2):133-41.

Marshall WF.  2009.  Centriole evolution  Curr Opin Cell Biol. 21(1):14-9..

Engel BD, Lechtreck KF, Sakai T, Ikebe M, Witman GB, Marshall WF.  2009.  Total internal reflection fluorescence (TIRF) microscopy of Chlamydomonas flagella
Methods Cell Biol. 93:157-77. 

Keller LC, Geimer S, Romijn E, Yates J 3rd, Zamora I, Marshall WF.  2009.  Molecular architecture of the centriole proteome: the conserved WD40 domain protein POC1 is required for centriole duplication and length control  Mol Biol Cell. 20(4):1150-66. 


Rasi MQ, Parker JDK, Feldman JL, Marshall WF, Quarmby LM  2009.  Katanin Knockdown Supports a Role for Microtubule Severing in Release of Basal Bodies before Mitosis in Chlamydomonas.  Mol. Biol. Cell  20, 379-388


Guo M, Marshall WF.  2009.  Testing for nonrandom shape similarity between sister cells using automated shape comparison.  Proc. SPIE  7184, 131-138


Ludington W, Marshall WF.  2009.  Automated analysis of intracellular motion using kymographs in 1, 2, and 3 dimensions.  Proc. SPIE  7184, 139-147


Marshall WF.  2008.  Basal bodies platforms for building cilia  Curr Top Dev Biol. 2008;85:1-22. 

Marshall WF.  2008.  Modeling recursive RNA interference  PLoS Comput Biol. 4(9):e1000183.

Rafelski SM, Marshall WF.  2008.  Building the cell: design principles of cellular architecture  Nat Rev Mol Cell Biol. 9(8):593-602. 

Marshall WF.  2008.  Use of transcriptomic data to support organelle proteomic analysis  Methods Mol Biol. 432:403-14.

Keller LC, Marshall WF.  2008.  Isolation and proteomic analysis of Chlamydomonas centrioles  Methods Mol Biol. 432:289-300.

Marshall WF.  2008.  The cell biological basis of ciliary disease  J Cell Biol. 180(1):17-21. 


Marshall WF.  2007.  Stability and robustness of an organelle number control system: modeling and measuring homeostatic regulation of centriole abundance  Biophysical Journal 93,1818-1833.

Feldman JL, Geimer S, Marshall WF.  2007.  The mother centriole plays an instructive role in defining cell geometry   PLoS Biology  5,e149.

Wemmer KA, Marshall WF.  2007.  Flagellar length control in chlamydomonas--paradigm for organelle size regulation   Int Rev Cytol. 260:175-212. 


Mogilner A, Wollman R, Marshall WF.  2006.  Quantitative modeling in cell biology: what is it good for?  Dev. Cell  11, 279-287.

Keller LC, Romijn EP, Zamora I, Yates JR, Marshall WF.  2005.  Proteomic analysis of isolated Chlamydomonas centrioles reveals orthologs of ciliary disease genes  Curr. Biol.  15,1090-8.

Nonaka S, Yoshiba S, Watanabe D, Ikeuchi S, Goto T, Marshall WF, Hamada H.  2005.  De novo formation of left-right asymmetry by posterior tilt of nodal cilia  PloS Biology  3,e268.


Zamora I, Marshall WF.  2005.  A mutation in the centriole-associated protein centrin causes genomic instability via increased chromosome loss in Chlamydomonas reinhardtii  BMC Biol. 3,15.

Stolc V, Samanta MP, Tonprasit W, Marshall WF.  2005.  Genome-wide transcriptional analysis of flagellar regeneration in Chlamydomonas reinhardtii identifies orthologs of ciliary disease genes  PNAS 102,3703-7.

Marshall WF, Qin H, Rodrigo Brenni M, Rosenbaum JL.  2005.  Flagellar length control system: testing a simple model based on intraflagellar transport and turnover  Mol. Biol. Cell 2005. 16,270-8.

Wemmer KA, Marshall WF.  2004.  Flagellar motility: all pull together  Curr Biol. 14(23):R992-3. 

Marshall WF.  2004.  Human cilia proteome contains homolog of zebrafish polycystic kidney disease gene qilin  Curr. Biol. 14,R913-4.

Zamora I, Feldman JL, Marshall WF.  2004.  PCR-based assay for mating type and diploidy in Chlamydomonas  Biotechniques 37,534-6.

Marshall WF.  2004.  Cellular length control systems  Ann. Rev. Cell Dev. Biol. 20,677-93.


Papers from Wallace's postdoc with Joel Rosenbaum, Yale MCDB

Marshall WF, Rosenbaum JL.  2001.  Intraflagellar transport balances continuous turnover of outer doublet microtubules: implications for flagellar length control.  J. Cell Biol.  155(3):405-14


Marshall WF, Vucica Y, Rosenbaum JL.  2001.  Kinetics and regulation of de novo centriole assembly. Implications for the mechanism of centriole duplication.  Curr. Biol.  11(5):308-17


Marshall WF, Rosenbaum JL.  2000.  Are there nucleic acids in the centrosome?  Curr. Top. Dev Biol.  49:187-205


Marshall WF, Rosenbaum JL.  2000.  How centrioles work: lessons from green yeast.  Curr. Opin. Cell Biol.  12(1):119-25


Marshall WF, Rosenbaum JL.  1999.  Cell division: The renaissance of the centriole.  Curr. Biol.  9(6):R218-20


Papers from Wallace's graduate training with John Sedat, UCSF

Marshall WF.  2002.  Order and disorder in the nucleus.  Curr Biol. 12, R185-92.


Marshall WF, Marko JF, Agard DA, Sedat JW.  2001.  Chromosome elasticity and mitotic polar ejection force measured in living Drosophila embryos by four-dimensional microscopy-based motion analysis.  Curr. Biol.  11(8):569-78


Marshall WF, Sedat JW.  1999.   Nuclear architecture.  Results Probl Cell Diff.  25, 283-301.  


Fung JC, Marshall WF, Dernburg AF, Agard DA, Sedat JW.  1998.  Homologous chromosome pairing in Drosophila melanogaster proceeds through multiple independent initiations.  J Cell Biol.  141(1):5-20.


Marshall WF, Straight A, Marko JF, Swedlow J, Dernburg A, Belmont A, Murray AW, Agard DA, Sedat JW.  1997.  Interphase chromosomes undergo constrained diffusional motion in living cells.  Curr. Biol.  7(12):930-9


Straight AF, Marshall WFSedat JW, Murray AW.  1997.  Mitosis in living budding yeast: anaphase A but no metaphase plate.  Science  277(5325):574-8


Nunnari J, Marshall WF, Straight A, Murray A, Sedat JW, Walter P.  1997.  Mitochondrial transmission during mating in Saccharomyces cerevisiae is determined by mitochondrial fusion and fission and the intramitochondrial segregation of mitochondrial DNA.  Mol. Biol. Cell  8(7):1233-42


Bass HW, Marshall WFSedat JW, Agard DA, Cande WZ.  1997.  Telomeres cluster de novo before the initiation of synapsis: a three-dimensional spatial analysis of telomere positions before and during meiotic prophase.  J. Cell Biol.  137(1):5-18


Oegema K, Marshall WFSedat JW, Alberts BM.  1997.  Two proteins that cycle asynchronously between centrosomes and nuclear structures: Drosophila CP60 and CP190.  J. Cell Sci.  110 ( Pt 14):1573-83


Marshall WF, Fung JC, Sedat JW.  1997.  Deconstructing the nucleus:  global architecture from local interactions.  Curr Opin Genet Dev. 7, 259-63.


Dernburg AF, Broman KW, Fung JC, Marshall WF, Philips J, Agard DA, Sedat JW.  1996.  Perturbation of nuclear architecture by long-distance chromosome interactions.  Cell  85(5):745-59


Marshall WF, Dernburg AF, Harmon B, Agard DA, Sedat JW.  1996.  Specific interactions of chromatin with the nuclear envelope: positional determination within the nucleus in Drosophila melanogaster.  Mol. Biol. Cell  7(5):825-42


Marshall WF, Agard DA, Sedat JW.  1995.  Quantitative analysis of chromosome motion in Drosophila melanogaster.  Proc. SPIE  2412, 33-42


Marshall WF, Agard DA, Sedat JW.  1994.  Motion estimation and visualization for four-dimensional optical microscopy.  Proc. SPIE  2184, 149-158.